# Deleted Rmd file in R

**URL:** <https://help.c-moor.org/t/deleted-rmd-file-in-r/226>\
**Category:** Help\
**Tags:** SciServer\
**Created:** [April 9, 2022, 7:55pm UTC](https://help.c-moor.org/t/deleted-rmd-file-in-r/226 "2022-04-09T19:55:49Z")\
**Posts on this page:** 10\
**Page:** 1

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**Author:** ![Anastasia\_Khalilova](https://avatars.discourse-cdn.com/v4/letter/a/45deac/32.png) [@Anastasia\_Khalilova](https://help.c-moor.org/u/Anastasia_Khalilova)\
**Post date:** [April 9, 2022, 7:55pm UTC](https://help.c-moor.org/t/deleted-rmd-file-in-r/226/1 "2022-04-09T19:55:49Z")

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I just deleted my Rmd file that had all of my plots, is there any way to recover this file in R? @LindsayHayes @mmccoy

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**Author:** ![Anastasia\_Khalilova](https://avatars.discourse-cdn.com/v4/letter/a/45deac/32.png) [@Anastasia\_Khalilova](https://help.c-moor.org/u/Anastasia_Khalilova)\
**Post date:** [April 9, 2022, 8:01pm UTC](https://help.c-moor.org/t/deleted-rmd-file-in-r/226/2 "2022-04-09T20:01:40Z")

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Also, I am trying to make a new markdown file in R so I can start rewriting the code just in case I can’t recover the file, but every time I try to save the file it says error saving, so I tried copying one of my draft files and working off of that but it is also saying “disk quota exceeded”

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**Author:** ![nullchar](https://yyz1.discourse-cdn.com/flex027/user_avatar/help.c-moor.org/nullchar/32/187_2.png) [@nullchar](https://help.c-moor.org/u/nullchar)\
**Post date:** [April 9, 2022, 9:28pm UTC](https://help.c-moor.org/t/deleted-rmd-file-in-r/226/3 "2022-04-09T21:28:05Z")

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That means that the disk has ran out of storage space. You can use the commands df -h and du -h in the terminal to see what is taking up space.

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**Author:** ![LindsayHayes](https://yyz1.discourse-cdn.com/flex027/user_avatar/help.c-moor.org/lindsayhayes/32/14_2.png) [@LindsayHayes](https://help.c-moor.org/u/LindsayHayes)\
**Post date:** [April 11, 2022, 5:58pm UTC](https://help.c-moor.org/t/deleted-rmd-file-in-r/226/4 "2022-04-11T17:58:51Z")

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You only have 10GB of space in your personal persistent directory. If you have some files in there you don’t need anymore clear them out so you stay below 10GB.

Though, I looked at your directory and you are well within the 10GB limits.

What file was lost?

Hope that helps!

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**Author:** ![jkim](https://avatars.discourse-cdn.com/v4/letter/j/258eb7/32.png) [@jkim](https://help.c-moor.org/u/jkim)\
**Post date:** [April 12, 2022, 6:13pm UTC](https://help.c-moor.org/t/deleted-rmd-file-in-r/226/5 "2022-04-12T18:13:57Z")

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@Anastasia_Khalilova  
Could you please provide the complete file path to the file you lost? We might be able to retrieve it from the backup.

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**Author:** ![jkim](https://avatars.discourse-cdn.com/v4/letter/j/258eb7/32.png) [@jkim](https://help.c-moor.org/u/jkim)\
**Post date:** [April 13, 2022, 6:12pm UTC](https://help.c-moor.org/t/deleted-rmd-file-in-r/226/6 "2022-04-13T18:12:36Z")

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Could you please check how much space left on your storage by clicking ‘view quotas’ on SciServer/Files tab(See image below) and let me know?

 ![quota](https://canada1.discourse-cdn.com/flex027/uploads/c_moor/original/1X/fc325be01eb7ffff2a77179c9d5b7d297e2434bb.png)

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**Author:** ![LindsayHayes](https://yyz1.discourse-cdn.com/flex027/user_avatar/help.c-moor.org/lindsayhayes/32/14_2.png) [@LindsayHayes](https://help.c-moor.org/u/LindsayHayes)\
**Post date:** [April 13, 2022, 8:41pm UTC](https://help.c-moor.org/t/deleted-rmd-file-in-r/226/7 "2022-04-13T20:41:45Z")

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I have plenty of space and the student’s folders also had plenty of space.

 ![Screen Shot 2022-04-13 at 4.38.50 PM](https://canada1.discourse-cdn.com/flex027/uploads/c_moor/original/1X/65040e02e97038a94ef7400460572fd5e9c4f815.png)

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**Author:** ![Anastasia\_Khalilova](https://avatars.discourse-cdn.com/v4/letter/a/45deac/32.png) [@Anastasia\_Khalilova](https://help.c-moor.org/u/Anastasia_Khalilova)\
**Post date:** [April 15, 2022, 12:14am UTC](https://help.c-moor.org/t/deleted-rmd-file-in-r/226/8 "2022-04-15T00:14:37Z")

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Hi! @jkim , I’m so sorry for the late response, I’m not sure why, but I don’t get discourse notifications even though they’re turned on in settings. The path for the file that I lose was " ~/workspace/Storage/Anastasia\_Khalilova/persistent/220407-ath\_mmu\_epi\_0010053.Rmd" and it says in View Quotas that I’ve used 10GB out of 10GB. The last part of that path after “persistent” is sort of guessed, I still have the nb.html file from the Rmd file but I don’t remember if I changed the name of the Rmd file slightly after I edited it some more and before I deleted it.

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**Author:** ![jkim](https://avatars.discourse-cdn.com/v4/letter/j/258eb7/32.png) [@jkim](https://help.c-moor.org/u/jkim)\
**Post date:** [April 18, 2022, 5:27pm UTC](https://help.c-moor.org/t/deleted-rmd-file-in-r/226/9 "2022-04-18T17:27:20Z")

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Could you please report your issue with deleted RMD file (what you replied me above) to SciServer help desk? Its email address is sciserver-helpdesk@jhu.edu.  
In this way, the SciServer team can directly communicate with you.  
Thank you.

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**Author:** ![Anastasia\_Khalilova](https://avatars.discourse-cdn.com/v4/letter/a/45deac/32.png) [@Anastasia\_Khalilova](https://help.c-moor.org/u/Anastasia_Khalilova)\
**Post date:** [April 18, 2022, 5:39pm UTC](https://help.c-moor.org/t/deleted-rmd-file-in-r/226/10 "2022-04-18T17:39:35Z")

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Okay, I will, thank you!
