Code for defined cell types

yanitrevino · July 19, 2022, 6:22pm

@lulu
Here’s the code:

plot_grid(plotReducedDim(sce, dimred = "umap", colour_by = "ENSMUSG00000022382", text_by = "celltype", text_size = 2),
                   plotReducedDim(sce, dimred = "umap", colour_by = "ENSMUSG00000033227", text_by = "celltype", text_size = 2))

What it looks like:

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Code for defined cell types

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