Coding Issue - PhyloSeq to Deseq

Help
1

Hello,

I am trying to use deseq on my analysis of the FeFiFo study data. However, when I run my code I get an error saying “all samples have 0 counts for all genes. check the counting script”

Code:

{2D669096-E089-475C-B03D-76614E536BDE}
{2D669096-E089-475C-B03D-76614E536BDE}952×399 24.8 KB

Could anyone help guide me on what I need to do to fix this issue?

Thank you!

2

Hi Luis,

Were you able to resolve this issue or do you still need some help?